rs51467766 SNP Detail

Summary

• ID
  rs51467766
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:148712063 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        CTACACGATA GTCGTGATAC TCTCTCCTCT TTCAATAAGT
  GAAGAAACTG AGGCACAGAG TTGAGTACCT TGCATGAAGT CACCATGAGA AAGAGGCCCC
  M
  CTAGGGTCTG AATCCTACAG CAAAAAACTA CTTGGATGTT TCAGTATTTC GGTTCCAGTT
  GACGAGTCCT AGTATAACTT TAAAAAGGCT GAAGGCTAG                       
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	DBA/2J
ss148013338	ENSMUSSNP4955994	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	DBA/2J
rs51467766					SNP	A	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:148712063 () rs orientation: forward

Symbol	Name	Function Class
Cpgi15308	CpG island 15308	394 bp distal
Rr100546	regulatory region 100546	62 bp distal
Rr398860	regulatory region 398860	356 bp downstream
Tardbp	TAR DNA binding protein	587 bp upstream
Tssr44612	transcription start site region 44612	860 bp upstream
Tssr44613	transcription start site region 44613	831 bp upstream
Tssr44614	transcription start site region 44614	573 bp upstream