rs51474958 SNP Detail

Summary

• ID
  rs51474958
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:43670568 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TGAAA TTTTGCTACT GTTATGAATT
  K
  CAATGTAAAC ATCTGATATA CAGGA                                      
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss145668079	ENSMUSSNP6584815	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs51474958					SNP	G	G	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:43670568 () rs orientation: forward

Symbol	Name	Function Class
Adgrf5	adhesion G protein-coupled receptor F5	774 bp upstream
Rr527086	regulatory region 527086	284 bp proximal
Rr527087	regulatory region 527087	785 bp proximal
Tssr144671	transcription start site region 144671	343 bp upstream
Tssr144672	transcription start site region 144672	645 bp upstream
Tssr144673	transcription start site region 144673	686 bp upstream
Tssr144674	transcription start site region 144674	709 bp upstream
Tssr144675	transcription start site region 144675	746 bp upstream
Tssr148115	transcription start site region 148115	1674 bp downstream