rs51475297 SNP Detail

Summary

• ID
  rs51475297
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:50620886 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTGAGCCATC TCCAGCCTAA
  AAATCTGATG TATTTTAAGT ATTATACTGT GGCAAAAAAA AAAAAAAAAT TCCCGATTTG
  GGGGGCATTT GGATTTCCCA CAGTACTTAG CTGGGTAAAT GCTCAACTCA TTTTTTTATT
  TCTAACAATG CATAATCTGA AGCATTGGGT CCAAGAATTC TGAGTGAGGG ACACTCAGCC
  Y
  GAACTCAGAC TCACATCACA AATAAATCAC AATCGCACAC TTGGCTATTT TTCTTTGACA
  CATACTTAAG TCTTTATTTA TTTTTATAGA TTTTTCCTTT TGTTTCCTGA AAACAGGAAT
  GATAATATCT ATTTTCTAAG GGTATGATGG CCAAATCAAT TCACACAAGA TAGAAAGCAT
  TCCATCCTAG CAGCCGTGGT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	MSM/Ms
ss136479844	ENSMUSSNP2983802	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	C	C	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	MSM/Ms
rs51475297					SNP	T	C	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:50620886 () rs orientation: forward

Symbol	Name	Function Class
Dixdc1	DIX domain containing 1	within coordinates
Gm39337	predicted gene, 39337	within coordinates