rs51476743 SNP Detail

Summary

• ID
  rs51476743
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:38355470 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTCCTTAGAC TCTACAGGGC
  TGAGTTCTTG TACTCCTTCC TTTATACCAT GATGCTTAGA ATACTGAATC TCTACCCATC
  CATTGTCTAG TCTGCATGCT TGAGTAGGGC TCTGCACTGG GTCTGAAAAA CCCTAAAGGG
  TGAGAGTCTA ACAAAGTCTA GGATAAATGG GTGCCTAGAG CTTGAATTTG TTGGTCCCTC
  S
  AGGGTTCACA GTGATGCACA AAGCCCTTTT AGAGCAGGTT ACAGTTTGGG GTGAGAAGGG
  TTAAAGGCTG AGAATTGGGG TTAGATCTTT GTGCTCTGCC ACACCCACCA AAGAATTCCA
  ATATTTCTAA ATTGGGGCCC AAACTTTTAC ATTTTGTTGT ATTTGTCAGG TAGAATGATA
  AAACTTTTTT TAAAGAACTT                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J	MSM/Ms
ss133127226	ENSMUSSNP2642738	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G	C
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J	MSM/Ms
rs51476743					SNP	G	G	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:38355470 () rs orientation: forward

Symbol	Name	Function Class
D0Nds34	DNA segment, Nuffield Department of Surgery 34	1260 bp distal
Rpl30-ps1	ribosomal protein L30, pseudogene 1	1381 bp downstream
Rr135132	regulatory region 135132	531 bp proximal
Rr146156	regulatory region 146156	1469 bp distal
Rr146157	regulatory region 146157	1930 bp proximal
Tssr55644	transcription start site region 55644	1797 bp downstream