rs51477763 SNP Detail

Summary

• ID
  rs51477763
• Variation Type
  SNP
• Alleles
  T

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:22534364 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        ACACTAGCCT CCTAGGCTAC AATCGCACAG CAAAATATAA
  CCTAGACGCT AAATTCCTTT TTTTTTTTTT TTTTAAGTAT AGAATAGAGT TTATTTAGGG
  T
  ATGGGGATGG GAGTTAAGAG AGTAGTAGAG GCAGAGAAAG ACAGAAGGAG AGAGTAGGTA
  AGTGGAGGCT GGCCATGCCC TCCTGGAGAG AGGGTGGAA                       
  
  T = T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J
ss145304157	ENSMUSSNP5218957	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J
rs51477763					SNP	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:22534364 () rs orientation: forward

Symbol	Name	Function Class
Gm7072	predicted gene 7072	546 bp upstream
Gm53992	predicted gene, 53992	within coordinates
Rr523017	regulatory region 523017	557 bp distal
Rr523018	regulatory region 523018	56 bp distal
Tssr146602	transcription start site region 146602	574 bp upstream
Tssr146603	transcription start site region 146603	537 bp upstream