rs51482523 SNP Detail

Summary

• ID
  rs51482523
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:29352028 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTGGCTTCGC AATTTTCAAG
  CGATGAGATG CCGTGAGGAC TAAACATGTC AAACATTTCA GTTCCCCTAT CTGTATTAAA
  CAGGAGCATC GATAGTTTCT GGGATTGCTG TAAAGATGAA GTGAACTAAT TGCCACTAAG
  AGTTTAAAAT AGCTCCTGCA TCTAATGAGC AAGTCATTTG TAGATAACAA TTTCTATCTG
  Y
  AGCTACCCTG TGGCCACTAT TTCGTTTACA AAGAGACAGT TACTTGTGGG CTGGAGGCCC
  CTTCCATTCT GTCATCAAGA TGAGGATAGT AGGTCATTTC ATGCACAGAA AAGACATACT
  GCTTTGCTTT GCTGGTGAGG CGACCTTGAG AATATCCTAA CCAAGAACCT GTGATAAGAG
  CTGGAGACAT AGGCCCCTTT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	MSM/Ms
ss136239103	ENSMUSSNP1768506	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	T	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	MSM/Ms
rs51482523					SNP	T	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:29352028 () rs orientation: forward

Symbol	Name	Function Class
Gm68891	predicted gene, 68891	within coordinates
Ntm	neurotrimin	within coordinates
Tssr84200	transcription start site region 84200	1640 bp upstream
Tssr84201	transcription start site region 84201	1665 bp upstream