rs51484280 SNP Detail

Summary

• ID
  rs51484280
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr14:52282051 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CACTGATCTT TTCTTTTGCA
  GTATCTAGTC TGCAACTGTT TAATGCATAT TTTCACTTGG ACCTGTCATT TTCATATCTA
  GATTTTGATT GCATCGTCCT CTGGTTTCCA TTTCTTTGCT CAGTTTTTGT ACCTTTCCTT
  TACTGAGAAC AGCTGCTTTC ATGTGCTTCT GAGCTAACTT GAACGTGTCT GTTCTGGCTT
  S
  CCTCATGCTT CACTAACCTC TTTATGGGTC ATATTTTCCT GTCTCTTTAC ATGCCTAATA
  ATTTGTTGGG ATATGAGATA TTGTGCATTG TCACCTCGTA GGGGCTAGAT GGTTTTGTTT
  CTTTTTTGTT GTTGTTGTGT TTTCTAAAAG GCCAAGGATT TTTTTGTAGA ATGAGATATG
  GTGCAGTGGG AGGGGTGTCT                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J	LG/J	SM/J
ss139499906	ENSMUSSNP2453421	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	G
ss324626879	CHEV_14_52664269	CHEVERUD	SCREENING_POP	f	SNP			C	G
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J	LG/J	SM/J
rs51484280					SNP	C	G	C	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:52282051 () rs orientation: forward

Symbol	Name	Function Class
Rr389655	regulatory region 389655	1133 bp upstream