rs51485032 SNP Detail

Summary

• ID
  rs51485032
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr10:115669898 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CATTAAAGCC AATCAGAGAA
  TGCCTTAGGT AGGTGAGGAA GGACAGAGAG ACAGCTTCAC ACAGTGTATG CCAACCTATC
  GGCTTAAATC TGAGTTTGCT CTAAACTTCA GAGTCTAAAA GAAGACACAT TTTAATGAGT
  CACGCCTTCA CTCCTTCAGT CAGTCATGCA ACGTGATCGT GTTTCTGTTT GTCAGACACT
  K
  CGTTCAGTGA TAGAGAAAAC CCTAAGACAG ACCCCATTGT GGGAGGAATC AGTAAAACCA
  TACTGTAGTG AGGGAAACTG AAGAGAAGGA TGAGGCTGGG GGAGGGAGCT TGCAAGCCAG
  AGGTGGAACT AATAATCTAT CTGTGTGAGG GAGGGTGTGT TGTTGAATTC CAGGAAGAGA
  GCCTGGGGTC CAAGGCTGCT                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss61319824	NES16926037	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	G	G	G	G	G	G	G	G	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs51485032					SNP	G	G	G	G	G	G	G	G	G	G	G	G	G	G	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss61319824	NES16926037	PERLEGEN	MM_PANEL	f	SNP	G/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:115669898 () rs orientation: forward

Symbol	Name	Function Class
Rr385334	regulatory region 385334	within coordinates
Rr439263	regulatory region 439263	within coordinates
Tspan8	tetraspanin 8	Intron
Tssr95839	transcription start site region 95839	951 bp downstream