ACATGAGATA TTCATCATGA AGGCCCGGGC AGGCAGAGCC TGAGTTTGAA CCCTCCTTTC TTCAAAGGAG GATTTCTTTG GATGCTCCAG TTTGACTTAA TAATCCCTGC TCCTCTCCTC TCATCGATGT GACTATGTTC ATTTTAGCAT AAAAGAAATT TCCCTCACTA AGTACTGCAA TCACATTACC TAGTTGCTTT W AAATCTTAGA GTGTAACTAA CAGTTCAGGA AGATGGACTA AGTTCTATTC ATCTTATCCA CAGGACATAT TCTACTAGCC CTGTTTAGTG GGTACTAGAG AGGCTCCAGA TGGTACCAAA CCTGTCATTT ACCATTTCCC ACATACAGGC CTCCCTCCCC CTCTCTCTCT CTCTTTTTTT TTAAAGATTT ATTTATTCAC W = A/T Note: Sequence in lower case indicates low-complexity or repetitive sequence |
Assay ID | Submitter SNP ID |
Submitter Handle |
Population | ss orientation |
Variation Type | 129S1/SvImJ |
A/J |
AKR/J |
BALB/cByJ |
BTBR T<+> Itpr3 |
C3H/HeJ |
CAST/EiJ |
DBA/2J |
FVB/NJ |
KK/HlJ |
MOLF/EiJ |
NOD/ShiLtJ |
NZW/LacJ |
PWD/PhJ |
WSB/EiJ |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
ss60386823 | NES15880816 | PERLEGEN | MM_PANEL2 | f | SNP | A | A | A | A | A | A | T | A | A | A | A | A | A | A | A |
SNP Consensus Information | ||||||||||||||||||||
SNP | Consensus Type | 129S1/SvImJ |
A/J |
AKR/J |
BALB/cByJ |
BTBR T<+> Itpr3 |
C3H/HeJ |
CAST/EiJ |
DBA/2J |
FVB/NJ |
KK/HlJ |
MOLF/EiJ |
NOD/ShiLtJ |
NZW/LacJ |
PWD/PhJ |
WSB/EiJ |
||||
rs51486808 | SNP | A | A | A | A | A | A | T | A | A | A | A | A | A | A | A |
Assay ID | Submitter SNP ID |
Submitter Handle |
Population | ss orientation |
Variation Type |
Alleles |
---|---|---|---|---|---|---|
ss60386823 | NES15880816 | PERLEGEN | MM_PANEL | f | SNP | A/T |
Location: Chr3:35390793 () rs orientation: forward | ||||||||
Symbol | Name | Transcript | Protein | Function Class |
Allele | Residue | Codon Position |
AA Position |
---|---|---|---|---|---|---|---|---|
Gm38512 | predicted gene, 38512 | 610 bp downstream | ||||||
Rr67159 | regulatory region 67159 | 1793 bp distal | ||||||
Rr67160 | regulatory region 67160 | 208 bp proximal |
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO) |
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last database update 12/17/2024 MGI 6.24 |
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