rs51490221 SNP Detail

Summary

• ID
  rs51490221
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr14:113811406 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CCATTGCAGT TTTAGTTACA
  AGTAAATGAT TTCAACTATA TCCACAGAGA TTAAAATCAT ACAAACTTAT CGTCTTAATA
  ATCTAAGTAA AATGCAGATG AGACTTTTCA ATGCAGTCCT TTCTGTACCA ATTCCATGCA
  TAATTCTTTC CCATAAGGGG TCCTTAAATA TAAGGATAAA AAATATATTA TTGCCTGCAA
  K
  GCATATTACA ATGGTGTATA TAGGTGTTTC TTATAGATAA TCTTGTTCCA ATAATGCAAA
  GTGAAAAGAC TCAGTGGTCA AACGTTATGA TATCCGGCCA TAAAAATTCA AATAAAGATT
  TACAACGGGT TTCAGGAACT GGCAATAAGT TTCGTGGCTC TTAAGTGTGA TCTGGGCTCT
  GAGATTGTCT TGGATGCTTA                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss52520524	NES15586828	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	G	G	G	G	T	G	G	T	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs51490221					SNP	G	G	G	G	G	G	G	G	G	G	T	G	G	T	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss52520524	NES15586828	PERLEGEN	MM_PANEL	f	SNP	G/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:113811406 () rs orientation: forward

Symbol	Name	Function Class
Tssr4518	transcription start site region 4518	553 bp upstream