rs51492155 SNP Detail

Summary

• ID
  rs51492155
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:153537087 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGTTCTGACC TTCAGACATC
  TGAAGGATTA GTAGCCTAAC ATTTCCTGAA AAAAAGTGAG CCTGAGACCA CCACCAGTCT
  GTCACCACAG GGCCTGGACA GGGAACTAGG TTGAGATGAC TACCAAGACA GTGCCAGGTA
  GGCCTGGACA GGCTCCCAGG ACAGGAAGCA AGCCAAAGGC GGGAAGAAGC CAACCTGGGA
  S
  AGCAGGCCCC AGGCAGGAGT GAGCCCAAGA CAAATGGCCG CACAGGTGGG CCGGTAGAGG
  AGCTGGCCTG AGATGAACAC TAATCTGTCG CCCTCCAGGC CTAGAGGGTG GGGACAGATC
  ATGCCCAAGA TGACTCCTGC CCTGTGCCAT ATTGCACAAG CAGGGCATAG CACTCCTGAG
  ACCTCTCCTG AGACGACCTC                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss136113978	ENSMUSSNP5744819	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	C	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs51492155					SNP	G	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:153537087 () rs orientation: forward

Symbol	Name	Function Class
Gm25757	predicted gene, 25757	158 bp downstream
Rr587767	regulatory region 587767	840 bp distal
Rr587768	regulatory region 587768	697 bp distal
Rr587769	regulatory region 587769	506 bp distal
Rr587770	regulatory region 587770	within coordinates
Rr587771	regulatory region 587771	225 bp distal
Rr587772	regulatory region 587772	360 bp proximal