rs51497829 SNP Detail

Summary

• ID
  rs51497829
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:68257851 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GAGAGAGAGA GAGAGAGAGA
  GAGAGAGAGA GGAGAAATTC TAAATTTTAG GATTATTGTA CAAAATGTTT GTTTCTCTTG
  ACTAATTTCT CAGTTCTCTG CCAGTGTTAA TTTTTTTTTC TTTGATGTCC CTATTCTAAT
  AAACCCAACC CCTCTTTGAT CTTGACTGGC TGTCAATAGA AAAATTTCTG CATATTACCA
  W
  TGAGGAACTT ACCCCTATTT CATAAAACAG TGTGTGAATG ACACTTAATT CATTATTCCT
  GAACACATGT GATTCCTGTG GTCTCATTAA GTTATGTGAG TATGCAAGGC TCTGTCTCAT
  GGATCCTCTA GATTATTTTA CTTCTCTAAA GGGCACAGCA TTTGAACACA CATATTCAAG
  ACTATTATTA TTACCCAACT                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J
ss146487444	ENSMUSSNP7188379	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J
rs51497829					SNP	A	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:68257851 () rs orientation: forward

Symbol	Name	Function Class
Rr376643	regulatory region 376643	1456 bp upstream