rs51498756 SNP Detail

Summary

• ID
  rs51498756
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr9:7351795 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATTCTAATTT TACTGTTAAT
  CAGGTTTCCT AGAACATAGG AAATGTTTAG GAAGCATCTT TTACTAAACT CAGGTGTCAT
  AAACAGTGAG AAATGTAGTG TACCCTGTGT TTTCCTCATC CAGTGGCACA GAAACCACTG
  TGTGCTTCAC AAGTGAGTAA ACAGAATCCA CAAGGTGAAC CAAACAAATT AGGTGGTTGA
  R
  CCAAGATTCA TATCCCAGCT GCTTGGCTCT AACTACACAT TATTAAAAGT AAAGTGGGAC
  CTTTAATCTT ATTTAGAATC ACAGGTAGAA ACATTCACAC CAGAATACAT TTCATTTGTC
  TGCCAATGAA ATGTTCCATA ACTGCAGACA ATTTTGGCTC CAAAGGGACT TTTTTTTTTT
  TTTCAGAAAT AGAATTGGTA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ
ss60680463	NES16229756	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	G	A	A	A	A	A	A
SNP Consensus Information
SNP					Consensus Type	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ
rs51498756					SNP	A	A	A	A	G	A	A	A	A	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss60680463	NES16229756	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:7351795 () rs orientation: forward

Symbol	Name	Function Class
Mmp12	matrix metallopeptidase 12	Intron
Tssr2759	transcription start site region 2759	1748 bp upstream
Tssr83705	transcription start site region 83705	1768 bp downstream
Tssr83706	transcription start site region 83706	1741 bp downstream
Tssr83707	transcription start site region 83707	1719 bp downstream
Tssr83708	transcription start site region 83708	1701 bp downstream
Tssr83709	transcription start site region 83709	1678 bp downstream
Tssr83710	transcription start site region 83710	1161 bp downstream
Tssr83711	transcription start site region 83711	679 bp downstream
Tssr83712	transcription start site region 83712	178 bp upstream
Tssr83713	transcription start site region 83713	580 bp upstream
Tssr83714	transcription start site region 83714	752 bp upstream
Tssr83715	transcription start site region 83715	804 bp upstream
Tssr83716	transcription start site region 83716	1075 bp upstream
Tssr83717	transcription start site region 83717	1116 bp upstream
Tssr83718	transcription start site region 83718	1136 bp upstream
Tssr83719	transcription start site region 83719	1162 bp upstream
Tssr83720	transcription start site region 83720	1191 bp upstream
Tssr83721	transcription start site region 83721	1443 bp upstream
Tssr83722	transcription start site region 83722	1645 bp upstream
Tssr83723	transcription start site region 83723	1769 bp upstream
Tssr88066	transcription start site region 88066	1672 bp upstream
Tssr88067	transcription start site region 88067	1185 bp downstream
Tssr88068	transcription start site region 88068	1233 bp downstream
Tssr88069	transcription start site region 88069	1680 bp downstream