rs51500598 SNP Detail

Summary

• ID
  rs51500598
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:29352036 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GCAATTTTCA AGCGATGAGA
  TGCCGTGAGG ACTAAACATG TCAAACATTT CAGTTCCCCT ATCTGTATTA AACAGGAGCA
  TCGATAGTTT CTGGGATTGC TGTAAAGATG AAGTGAACTA ATTGCCACTA AGAGTTTAAA
  ATAGCTCCTG CATCTAATGA GCAAGTCATT TGTAGATAAC AATTTCTATC TGTAGCTACC
  M
  TGTGGCCACT ATTTCGTTTA CAAAGAGACA GTTACTTGTG GGCTGGAGGC CCCTTCCATT
  CTGTCATCAA GATGAGGATA GTAGGTCATT TCATGCACAG AAAAGACATA CTGCTTTGCT
  TTGCTGGTGA GGCGACCTTG AGAATATCCT AACCAAGAAC CTGTGATAAG AGCTGGAGAC
  ATAGGCCCCT TTGGGACAGT                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	MSM/Ms
ss136239106	ENSMUSSNP422937	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	MSM/Ms
rs51500598					SNP	C	C	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:29352036 () rs orientation: forward

Symbol	Name	Function Class
Gm68891	predicted gene, 68891	within coordinates
Ntm	neurotrimin	within coordinates
Tssr84200	transcription start site region 84200	1632 bp upstream
Tssr84201	transcription start site region 84201	1657 bp upstream