rs51501452 SNP Detail

Summary

• ID
  rs51501452
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr14:52282886 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CCACTGCCCT CTGACTGAGT
  TTTCCCAGTT ACAGTTGCAG CAATTACAAC GCCACAGCAT TACTCTTATC TCCCCGTGTG
  CATTAAACAC TCCTTCCTCT GGTTTTTGTC TGTTTGGTTT CTGTTTGCTT TACAGTAACA
  AGAGCCATAT GCACGACTAA AGTCATGGGA CTCACAGAAT GCACAGAAAA CCTGCTCCTC
  S
  TTCTTTAGTT CCATCTCAGA CATCCCACTG TGCACCAGGA GAGGGAGCCC ACTTCAAAGA
  CAGTGTTGTT TGAACTCTCA GGGGCGAGCC ATCCTCCCTG TGTCTACTCT GTTCACATGC
  TATTGTAGGG GCTGCTCCCA CGGCACTTCA GGGTTCCACC GTGTGTGTTG GAGGGGTGGA
  GTGAGGGAGC TGGGGGTGGG                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	BTBR T<+> Itpr3/J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
ss52719930	NES15554990	PERLEGEN	MM_PANEL2	f	SNP	C	G	G	G	G	C		G	G	G	C		G
ss324626889	CHEV_14_52665104	CHEVERUD	SCREENING_POP	f	SNP							C					G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	BTBR T<+> Itpr3/J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
rs51501452					SNP	C	G	G	G	G	C	C	G	G	G	C	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss52719930	NES15554990	PERLEGEN	MM_PANEL	f	SNP	C/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:52282886 () rs orientation: forward

Symbol	Name	Function Class
Rr389655	regulatory region 389655	298 bp upstream