rs51504177 SNP Detail

Summary

• ID
  rs51504177
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:35017274 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CCTGT CAGAAAAAGG AAAGATTCCA
  M
  TTCTTGGGGT TGGATATGTA GCTCA                                      
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	LG/J	SM/J
ss148806722	ENSMUSSNP5278125	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	C
ss322156916	CHEV_7_36102868	CHEVERUD	SCREENING_POP	f	SNP			C	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	LG/J	SM/J
rs51504177					SNP	A	C	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:35017274 () rs orientation: forward

Symbol	Name	Function Class
Cpgi18869	CpG island 18869	218 bp proximal
Gpatch1	G patch domain containing 1	within coordinates
Tssr72030	transcription start site region 72030	559 bp downstream