rs51505325 SNP Detail

Summary

• ID
  rs51505325
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:73293002 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GAATGGTGTC CTAACCTGCA
  CGGAGCCTTG GGTTCAACTC AAGAACCACA TAAAACTCGG TGTGGCAGCA CACACCTATA
  GTTTGAGCTT TCACGGGGAA GATCAGAAGT TTAAGATCAT TCTCAGCTAC TTGGGGAGGA
  AAGAAAACAC CTCTTGTTTG CAGTTACCCA GTTAGAAACT GAAGGAGCAA TGACTAAACT
  S
  GGACTTCATG ATGCTGTGAG TTGGAGCTCT GAAATGCTGC ATGTCCGGAA GCAAGAGGCA
  ACACTCATCA GCTTTTAGAG CCATGAAGAG TAAGTTAATG GAAGATGAAG CTGGAAGAGC
  AAGGACCTCA GGGAAGCAGA ATTCCACTCC ACTGAGTGCC AGATGACATT GTACTGAGGG
  AGAAGGCTGG GTATTGCCAG                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss62893088	NES17390919	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	C	G	G	G	C	G	G	C	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs51505325					SNP	G	G	G	G	G	G	C	G	G	G	C	G	G	C	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss62893088	NES17390919	PERLEGEN	MM_PANEL	f	SNP	C/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:73293002 () rs orientation: forward

Symbol	Name	Function Class
Gm23649	predicted gene, 23649	1791 bp upstream
Rr342860	regulatory region 342860	1802 bp distal