rs51505757 SNP Detail

Summary

• ID
  rs51505757
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:82515733 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ACCTCTAGCC TTCTGTGCCG
  GACCTTGTCC CCAGGACCCC GAGGAAAACC CTTCTCTTTC TCTTTAGAGA TGGCTTCTTC
  CTCCTTGATG CTTCCTCCAG CACTAAGCGC GTTCCAGCTT CTCACTGGAT GGCACCTGCT
  TGGCCTCTCG TCTCAGTAGC TTCTCAGTTA CAACCTTTAC CTGGATTCTG TTCCAAGAGC
  S
  GAAATGAACA CAATGTTGCT GCTTGGTTAT GGGTTTGATA AGATTCTTAT CACTTAAGGC
  TAGAATGTTG TTTTTGATCA CCTGACATAG CTCAAGGCTG CGTCGGCCTG AGTTCACAGG
  CATCCAATAC TAGGACATTT TTCTTAGGGT TGGAATGAGA CTTGTCATTG TCTCAGGTCA
  ATTTTCATCT TTTCACCGGT                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss61656680	NES17599901	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	C	C	C	C	C	C	G	C	C	C	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs51505757					SNP	C	C	C	C	C	C	C	C	C	C	G	C	C	C	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss61656680	NES17599901	PERLEGEN	MM_PANEL	f	SNP	C/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:82515733 () rs orientation: forward

Symbol	Name	Function Class
Gm61154	predicted gene, 61154	within coordinates
Rr387523	regulatory region 387523	1881 bp downstream
Rr469294	regulatory region 469294	1001 bp distal
Rr469295	regulatory region 469295	855 bp distal
Rr469296	regulatory region 469296	223 bp distal
Rr469297	regulatory region 469297	593 bp proximal
Rr469298	regulatory region 469298	1152 bp proximal
Rr469299	regulatory region 469299	1220 bp proximal
Rr469300	regulatory region 469300	1423 bp proximal
Rr469301	regulatory region 469301	1682 bp proximal