rs51509636 SNP Detail

Summary

• ID
  rs51509636
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr13:36395402 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGACCTTAAG CCCTGGTTCA
  ATCCTTAGCA CCACCAAGAA CAGAAAGAAA GAGAGCCTGA AGGCTGGAGA GGTGGCTCAG
  TGGTTAAGAG TGGGAACTGT TCGTGCAGAG GATCTGTGTT CAGTTCATAT CGTCCATGTC
  AGACAACTTA CCATGCCCTG TAACTCCACC TCCACGGCGA TCCAATGCTT CTAGCTTATT
  Y
  CAGCATTCGT ACTTACATTC ATATACCCAT ACACAGATCC ACCTATCCAA ATAATAAACG
  CAAATCAATT TTAAAAATCT TAGAAGGATA CAAACACTAG ATAACAGAAA CTAAAGCTAT
  TTTCTTTGCA TATGACAAAA TTATACACAT CAAAAATTTA ATAGAATATC CAGACTTATT
  TGGAGTAGAA AGAGAATTCA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J	MSM/Ms
ss148872111	ENSMUSSNP737388	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	T	C
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J	MSM/Ms
rs51509636					SNP	T	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr13:36395402 () rs orientation: forward

Symbol	Name	Function Class
Fars2	phenylalanine-tRNA synthetase 2, mitochondrial	within coordinates
Gm40912	predicted gene, 40912	within coordinates
Rr279014	regulatory region 279014	1863 bp distal
Rr286029	regulatory region 286029	within coordinates