rs51511219 SNP Detail

Summary

• ID
  rs51511219
• Variation Type
  SNP
• Alleles
  C

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:35500997 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TAAAC ACCATCAAAC ACGTCTCTCC
  C
  TTGGCGGGCG AAACACAGTA ACTTA                                      
  
  C = C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J	LG/J	SM/J
ss148817653	ENSMUSSNP2239751	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C
ss322158670	CHEV_7_36586591	CHEVERUD	SCREENING_POP	f	SNP			C	C
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J	LG/J	SM/J
rs51511219					SNP	C	C	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:35500997 () rs orientation: forward

Symbol	Name	Function Class
Cpgi18877	CpG island 18877	801 bp proximal
E130304I02Rik	RIKEN cDNA E130304I02 gene	1020 bp upstream
Gm73276	predicted gene, 73276	1568 bp downstream
Rr645475	regulatory region 645475	614 bp proximal
Rr645476	regulatory region 645476	1031 bp proximal
Rr645477	regulatory region 645477	1407 bp proximal
Tssr72060	transcription start site region 72060	1396 bp downstream
Zfp507	zinc finger protein 507	within coordinates