rs51511634 SNP Detail

Summary

• ID
  rs51511634
• Variation Type
  SNP
• Alleles
  G

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:107750086 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      G CCCGCCGGGA GATGAAGTAC GGCCGCAAAT CCCGCGGCCT
  CCTCTCCCGC CGTGCCCTGC GCGCAGCGGC TTTGACGGCT GGTGGAGCTG CTGCCCAATG
  G
  AAAGGCACGC TGTTAGCCAC TGCCCAATTA GAAGGCACGC TTCTCCGCAG GGCCTGCCGG
  GAGTTATGGT TTGGCTTCAG TGCTGTCACT GCTTCTCTGG T                    
  
  G = G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	DBA/2J
ss136950647	ENSMUSSNP1415981	ENSEMBL	ENSEMBL_Sanger	f	SNP	G
SNP Consensus Information
SNP					Consensus Type	DBA/2J
rs51511634					SNP	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:107750086 () rs orientation: forward

Symbol	Name	Function Class
4930506F14Rik	RIKEN cDNA 4930506F14 gene	within coordinates
Cpgi22310	CpG island 22310	within coordinates
Rbm6	RNA binding motif protein 6	within coordinates
Rr401668	regulatory region 401668	within coordinates
Rr686633	regulatory region 686633	389 bp distal
Rr686634	regulatory region 686634	77 bp distal
Rr686635	regulatory region 686635	within coordinates
Tssr87026	transcription start site region 87026	73 bp upstream
Tssr91474	transcription start site region 91474	465 bp upstream
Tssr91475	transcription start site region 91475	140 bp upstream
Tssr91476	transcription start site region 91476	106 bp upstream
Tssr91477	transcription start site region 91477	76 bp upstream
Tssr91478	transcription start site region 91478	43 bp upstream