rs51517257 SNP Detail

Summary

• ID
  rs51517257
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:68259636 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CAGAAGAAGA GAAGATTAGT
  AGAATATAAG TACAAAATAT GTCACTTTGG CATAGCAGTG ATTTCAAGAG AAGATGATTG
  GTTTAAAGTA GATTAAAAAG AAAGCTCTCT GACACTTCTT AGATAAATCA AAGCACTAGC
  ATCTTTCCCA ACTGCATAAT AAACATGGAA GTCATGTTTC CCATACGTTC TTGAAGAATG
  Y
  CAAAGGTTAA TCTCTAGGAT TGAGTTTAGA CCTTTATCCA TCCACAGGTG ACAACAGTGA
  GACTGTCATC CAGTTCTGTG CCCCTTCCAA ATTCTTGTCT TCAATGTTCA ACATACATGT
  AGTGGCTATT CCTGGCTGTC AACTTGACTA TATTTGGAAT GAACTGCAAT CCAGAATTGG
  AAGGCTCTCC AGTGACCCTT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss146487515	ENSMUSSNP7167667	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	C	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs51517257					SNP	T	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:68259636 () rs orientation: forward

Symbol	Name	Function Class
Rr376643	regulatory region 376643	within coordinates
Rr376644	regulatory region 376644	1636 bp upstream