rs51518887 SNP Detail

Summary

• ID
  rs51518887
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr15:98155886 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        AGGGAGCCTC AAGTGGCCAG TAGACTCCCA AGCTGCAGTG
  ACTGGGAAAG CTCTTTTCCA GAGAAGGCTG AGGAGGAACT GAAAGAACCT AATGGGGAAA
  S
  CCCCACTCAG CTCCCGATTC GGCGTCCACC CAAGAATCAT GAATAGAACA CAACACCTTG
  ATGTAACAAC ACGAGGTATT TTAATGGCAG AACTCCAGG                       
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss325078975	CHEV_15_98088436	CHEVERUD	SCREENING_POP	f	SNP	G	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs51518887					SNP	G	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr15:98155886 () rs orientation: forward

Symbol	Name	Function Class
Cpgi7649	CpG island 7649	822 bp distal
H1f7	H1.7 linker histone	712 bp upstream
Rr311340	regulatory region 311340	1122 bp distal
Rr391174	regulatory region 391174	within coordinates
Tssr136230	transcription start site region 136230	693 bp upstream
Tssr136231	transcription start site region 136231	573 bp upstream