rs51523455 SNP Detail

Summary

• ID
  rs51523455
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:125924329 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CAGAT GGCAACTGTG ACAGAGGTCC
  M
  GAGCTGGTCT ATGTATGTGC AGAGG                                      
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss145872405	ENSMUSSNP6968291	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C	A
ss322450551	CHEV_7_133468671	CHEVERUD	SCREENING_POP	f	SNP				A	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs51523455					SNP	C	C	A	A	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:125924329 () rs orientation: forward

Symbol	Name	Function Class
D7Csu3	DNA segment, Chr 7, Central Connecticut State University 3	195 bp proximal
D7Csu4	DNA segment, Chr 7, Central Connecticut State University 4	within coordinates
Rr153599	regulatory region 153599	929 bp distal
Rr153600	regulatory region 153600	472 bp proximal
Rr381445	regulatory region 381445	within coordinates
Tssr69016	transcription start site region 69016	1165 bp downstream
Tssr74630	transcription start site region 74630	225 bp upstream