rs51526299 SNP Detail

Summary

• ID
  rs51526299
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:33023753 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AAGTGAATTT AAAAAATAAA
  AATAAATAAA AGAAAGAAAG AAAATAAATA CTGCTTACTT GGGATCAAAA TCATAAAATG
  ACATGGCCTG ACGTTTCCAG TCAAGGTGTT TCACAACCAA TCCAAATGAA CACCATCCCT
  CAGAAATCTA CTTTACAACA ACTTCCTTTA CAACAGATGA TTCATTACAA TTTAAACCTG
  R
  TTGTAAACTA CATTCTTTAA ACAATGGAAC CCAAAATAAA TTATTGCTAA GATCTTACTT
  TTAAATAGAA GAAAGAAAAA GCCCGCAGTG CACCATATTC CCAGAGAGAA TCTCATCCAA
  GTACTAACCA AGCCAGCCCC TGCTTAGCTT CCGAGATCAG GTGACATTGA GCACACACAG
  AGATATCTTA CATTTTAAAG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	AKR/J	CAST/EiJ	FVB/NJ	MOLF/EiJ	NOD/ShiLtJ	PWD/PhJ	WSB/EiJ
ss62681156	NES17310243	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	A	G
SNP Consensus Information
SNP					Consensus Type	A/J	AKR/J	CAST/EiJ	FVB/NJ	MOLF/EiJ	NOD/ShiLtJ	PWD/PhJ	WSB/EiJ
rs51526299					SNP	G	G	G	G	G	G	A	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss62681156	NES17310243	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:33023753 () rs orientation: forward

Symbol	Name	Function Class
A930009K04Rik	RIKEN cDNA A930009K04 gene	1244 bp downstream
Gm55909	predicted gene, 55909	88 bp downstream
Tssr147401	transcription start site region 147401	919 bp downstream
Zfp811	zinc finger protein 811	within coordinates