rs51529718 SNP Detail

Summary

• ID
  rs51529718
• Variation Type
  SNP
• Alleles
  C

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:87455600 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      C AGAGAGCACC CATCTACCTT GTGAATTATG AGAACACTGG
  AAGTTACACT GTCACCTTCT CTCCAGCCTC TGTCCTTTCT CCTATTTTAT TGGTTCACAC
  C
  TAAGGCAAAA ACTCTTTGCT CTGTTGGATG GCTTTTTGGG ATTGTCCCCA TTCTGCAGAT
  GAGAAAAATG AGGCATGGGG AAACTAATAC AATACCGTTG G                    
  
  C = C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	DBA/2J	MSM/Ms
ss137929664	ENSMUSSNP2231330	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	DBA/2J	MSM/Ms
rs51529718					SNP	C	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:87455600 () rs orientation: forward

Symbol	Name	Function Class
Cpgi4942	CpG island 4942	520 bp distal
Gm33444	predicted gene, 33444	within coordinates
Rr268858	regulatory region 268858	1402 bp proximal
Rr387583	regulatory region 387583	1869 bp upstream