rs51537346 SNP Detail

Summary

• ID
  rs51537346
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr15:4027205 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TAGAA TGTGCCAAAA ATATGAAAGA
  W
  GCAAATTGAT CACATTCGAA CTACC                                      
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J
ss147038925	ENSMUSSNP5772044	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	T
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J
rs51537346					SNP	A	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr15:4027205 () rs orientation: forward

Symbol	Name	Function Class
Cpgi6911	CpG island 6911	1430 bp distal
Gm2093	predicted gene 2093	within coordinates
Rimoc1	RAB7A interacting MON1-CCZ1 complex subunit 1	1979 bp upstream
Rr369897	regulatory region 369897	771 bp downstream
Rr498628	regulatory region 498628	1990 bp distal
Rr498629	regulatory region 498629	1676 bp distal
Rr498630	regulatory region 498630	882 bp distal
Tssr133596	transcription start site region 133596	1963 bp upstream