rs51551450 SNP Detail

Summary

• ID
  rs51551450
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr15:73358237 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TACATTGGTA CTTCTGAGGC
  ATCTGGGTTT GTGGACTGAA TAGCTGTTGG TTTTCTGTTC TCTCCAGGGT GCAGTAGCAA
  TTGCTGGGCT ACCTGGCTCC CCACCCCTGT GGCTTCTTGT CCTCTAGGGA ACCCTGCCTA
  AAATACCGTG TACCACCCAC CCATCTACCT AACAAATAGC TCTTGAGGTC TACCAGGAGC
  Y
  AGGCACTGGT GAGCATTGGT AACCATGGCT TCTGTCCCCA GGGTCCTTTT GATGAGAAGA
  TGACACTGTA TAAAGAGGCT ACAACAAGAA CACCGAGCTG CTGCAAGGTG CCTGGTCCAG
  GCAGACACAA GGAACAGGTT TTCACTGGCA TGGGGCCAAT CCTCTTGCTT AGGTATCCGT
  TCACAAGGCA TATTTGCTCC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss148110598	ENSMUSSNP7106909	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	T	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs51551450					SNP	C	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr15:73358237 () rs orientation: forward

Symbol	Name	Function Class
Gm63120	predicted gene, 63120	within coordinates
Rr504083	regulatory region 504083	within coordinates
Tssr4621	transcription start site region 4621	1434 bp upstream
Tssr4622	transcription start site region 4622	1496 bp upstream
Tssr131529	transcription start site region 131529	1446 bp upstream
Tssr134702	transcription start site region 134702	880 bp downstream
Tssr134703	transcription start site region 134703	920 bp downstream
Tssr134704	transcription start site region 134704	935 bp downstream
Tssr134705	transcription start site region 134705	947 bp downstream