rs51552634 SNP Detail

Summary

• ID
  rs51552634
• Variation Type
  SNP
• Alleles
  A

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:71442636 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TCAAA ATATGGCCTC AGAGTTCATA
  A
  TCTTTCCATA CCCCATGTGG TCTCT                                      
  
  A = A
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	LG/J	SM/J
ss146746991	ENSMUSSNP6347972	ENSEMBL	ENSEMBL_Sanger	f	SNP	A
ss320339046	CHEV_2_71450349	CHEVERUD	SCREENING_POP	f	SNP		A	A
SNP Consensus Information
SNP					Consensus Type	A/J	LG/J	SM/J
rs51552634					SNP	A	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:71442636 () rs orientation: forward

Symbol	Name	Function Class
Gm74655	predicted gene, 74655	789 bp upstream
Gm74658	predicted gene, 74658	within coordinates
Rr558784	regulatory region 558784	1163 bp distal
Rr558785	regulatory region 558785	299 bp proximal
Rr558786	regulatory region 558786	800 bp proximal