rs51553095 SNP Detail

Summary

• ID
  rs51553095
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:152611862 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTGTCGTTGT TGTGACAGGA
  CTCGTGGAGG CTAACCTGGA ACCTGGATGA CCTTGAACTT GTGACCCTCC AAGGGCTGGA
  GTTAACAGGT CAATCCTGTC TCATCAGCAC GGGTGTGATG TGTGTGTGAG AGGCAAGCAC
  TCCACCAGAC AGCCACACCT ACCTTTCCTT ATCTACAAAA GCAGCCGCTT TCTGAGGCGC
  Y
  GAGGGTGAGG AGTTGGAGAT GTGGATTTGA GGACTATGAT TGAACCCATA GCTGGGCTCA
  GGTTTATTCC ATGTGGGCAC CCTAGTCATA AAAGAGGAAT GAGTAGGGAC ACTACTCAGA
  GCTTTGTGGA AACACTGTAA AACTTTGTTC CCTTTTTGTT TTTTGTTTTT AAGTAGTCAC
  ATATGACATG CCCCTTATGG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss147974188	ENSMUSSNP209541	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	C	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs51553095					SNP	T	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:152611862 () rs orientation: forward

Symbol	Name	Function Class
Rr374091	regulatory region 374091	1796 bp upstream
Rr567462	regulatory region 567462	1701 bp distal
Rr567463	regulatory region 567463	within coordinates