rs51553196 SNP Detail

Summary

• ID
  rs51553196
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:131665247 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TAAAAACTAA TTAGATATAG
  AAGAAATATA ATCATTTTAC TCTAGAATAT TTATTTAATG TTTAATTAAC ATGTAAGCTC
  CTTTGTAGGT ATGACAAGTT TCAGAATAAG AAAAAAGTGG TATTTGTGAA TAATTGTACT
  TACTGATAAA TTTCATAAAG ATTTTAAAAA TAAAGCACAT TATGATTTTA ACAGTTTCAA
  R
  CTTACACTAC AATGCTCTTC TCTTTCTTTT CCTTTTCTGT ACAATTTTCT ATGTACTTCC
  ATGTCTCGTG TATATATGTC TTGTGTCCTA AAATTGTACT CTTTTCATCA GTAAGGTCTT
  ATAAAATTCT AGTGAGTAAG CAAGAATAAT GGTGACCAGC TGTTTATTTG AGGGAACCTC
  CTCTCTGTCT GATTTGGTGT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss60948230	NES16180337	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	G	G	G	G	A	G	G	A	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs51553196					SNP	G	G	G	G	G	G	G	G	G	G	A	G	G	A	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss60948230	NES16180337	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:131665247 () rs orientation: forward

Symbol	Name	Function Class
Tas2r105	taste receptor, type 2, member 105	821 bp upstream
Tas2r114	taste receptor, type 2, member 114	850 bp downstream