rs51554330 SNP Detail

Summary

• ID
  rs51554330
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr18:81477287 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTATGAATTG ATGTCTGACC
  TTCTAAATAT TGCCACTGTG TATTGAAGAT GAAATAAGTT TAAAGTCTTC AATCCAATTC
  ATTACTTTAT ACCAAGTCAT TTCTTTTCTG AAAATTCCAT ACAATTCCAG CTCCTGAAAA
  TAACACCTAT ATTTTATAAG TATTACAATT TTAGCTCACA TCTGAGCTAG TGGCTGCTTT
  R
  AGCGCACATA TCCCACAGAG TTCGCTGAGA AATCAGGGTG GTCGTTATGC ATGGGGATGT
  CCTGTGTGCT GGTGCAATAA CAGAAAACAT AATTTCAATA TTGAGTTTAT TCGGACATTG
  AGAGACTGCT TTATTTATCA TATATTGAAT GTTACTAAAG CACATTTCAG AAATGGAGAT
  GAGATAAACT TCTGTAGGTA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
ss63200816	NES17463333	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A	A	G	A	A	A	A	A	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
rs51554330					SNP	A	A	A	A	A	A	G	A	A	A	A	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss63200816	NES17463333	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr18:81477287 () rs orientation: forward

Symbol	Name	Function Class
Gm30288	predicted gene, 30288	861 bp downstream