rs51555487 SNP Detail

Summary

• ID
  rs51555487
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:130914105 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        ACTGTAGTTA TCCTCAGACA CTCCAGAAGA GGGAGTCAGA
  TCTTGTTATG GATGGTTGTG AGCCACCATG TGGTTGCTGG GATTTGAACT CCTGACCTTC
  R
  GAAGAGCAGT CGGGTGCTCT TACCCACTGA GCCATCTCAC CAGCCCCCCT GTCCATATTT
  CTAACCCACA GAATTGTAAA TGGGATAGCT TGTTTCCAA                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss147598522	ENSMUSSNP505372	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs51555487					SNP	G	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:130914105 () rs orientation: forward

Symbol	Name	Function Class
Siglec1	sialic acid binding Ig-like lectin 1, sialoadhesin	within coordinates
Tssr26345	transcription start site region 26345	1026 bp upstream
Tssr26346	transcription start site region 26346	936 bp upstream
Tssr26347	transcription start site region 26347	905 bp upstream
Tssr26348	transcription start site region 26348	788 bp upstream
Tssr26349	transcription start site region 26349	438 bp downstream
Tssr26350	transcription start site region 26350	451 bp downstream
Tssr26351	transcription start site region 26351	468 bp downstream