rs51556083 SNP Detail

Summary

• ID
  rs51556083
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:124019748 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GTGCATTTAC AAATGTGAAT
  AAAATCCGTA GTTAAGAGTC AAGAATGTCT CAATATTTAA ACTCTTAAGA AAGTTTAGAG
  CTCATTTGCC TGTGATACAA ATAGGATTCT AATAACTACT ACTACTAACA AGAAAAAAGA
  CATAGTTTTA ATAGACTAAA GCTTCAGCAA CTGAAGAGAT GACTCAGTGC TCAAGCAATT
  R
  TTCTTGCATA CGATCCAGGT TCCTCCCCAG GCACCCACAA AGTGGTTCAC AACCATCTGT
  AGCTAAAGTT CCACGGGATC AGGTGCCCTC TTCTGTCCAC TGTGGGCACT GCACACATGC
  AGTGCACAGA CATACACGCA GGCAATGCTC GTATTACACA TAGAATAAAA TAAACCTAAA
  ATAGAAGAAA ATTACAAAGA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss135782592	ENSMUSSNP2403317	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	A	G
ss320926407	CHEV_3_123929017	CHEVERUD	SCREENING_POP	f	SNP				G	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs51556083					SNP	G	A	G	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:124019748 () rs orientation: forward

Symbol	Name	Function Class
Rr584579	regulatory region 584579	80 bp proximal