rs51556242 SNP Detail

Summary

• ID
  rs51556242
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:66103069 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGCTTGCCAG TATGTATGCT
  GTATGTCTAG ACACCTGTGT GTCTGGTGCC CTCAGAGCTT GGAATTGGGA ATCAGATCCT
  TGGAACTGGA GTTACCGATG GTTGAGTAGC CATGTGAGTC CTGGGAAACA AACCCAGGTC
  CTCTACAAGA GCAACCAGTA TGCTTATCCA CTGAGCCATC TCTCTATCCC TAACATGTCC
  Y
  TCTTAAAAAA CATACTACAT TGCTGAGAGT GGTGGTACAT GCCTTTAATC CCAGCACTTA
  GGAGGCAGAG GCAGTTGGAC TATTTCTGTG AGACTGAGGC CAGACTGATT TACAGAGTGA
  GTTCTAGGAC AGTCAAGGCT ACACAAAGAG ACCCTGTCTC GAATAAAACA ACAAAAAAAT
  TACATTTGTG TGTGTGTGTG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	DBA/2J	MSM/Ms
ss136573323	ENSMUSSNP4864374	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	T	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	DBA/2J	MSM/Ms
rs51556242					SNP	T	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:66103069 () rs orientation: forward

Symbol	Name	Function Class
Dapk2	death-associated protein kinase 2	within coordinates
Rr210270	regulatory region 210270	670 bp distal
Rr210271	regulatory region 210271	733 bp proximal