rs51560782 SNP Detail

Summary

• ID
  rs51560782
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr14:14462478 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ACACCACACA CACACACACA
  CACACACACA CCACACACAG ACACACACAC ACCACACACA CCACACACAC CACACACAGA
  CACACACACA CCACACACAC CACACACACA CACTACCACT GCCACCACCA CCATCAGTTT
  TTCTTATTAA TTTTGAGCAT CTGACTGGCT GAAGCTGGCC TTGAATGTTT CCTGTGCTGG
  M
  AGGCATGGCC TTGGTGAATC TCCTGTCCTA GTTGCAACCC TGTTGCAGCT CAGATTACAA
  GCTTGCACTG CAAGGCCAGT GGAAAATGTG TTACTTTTTA ATTTCTCTGA AATTGCATTT
  AGTTGGAATA CAAATTGACA AATATGTTGA GCTTAGATAC TTTAAGACAT AAATCTTTAT
  ACATTTCCCT GCTCTAGGAA                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	FVB/NJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
ss62079944	NES17153387	PERLEGEN	MM_PANEL2	f	SNP	C	A	A	A	A	A	C	A	A	A	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	FVB/NJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
rs51560782					SNP	C	A	A	A	A	A	C	A	A	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss62079944	NES17153387	PERLEGEN	MM_PANEL	f	SNP	A/C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:14462478 () rs orientation: forward

Symbol	Name	Function Class
Abhd6	abhydrolase domain containing 6	within coordinates
Tssr124225	transcription start site region 124225	754 bp downstream
Tssr124226	transcription start site region 124226	693 bp downstream