rs51561145 SNP Detail

Summary

• ID
  rs51561145
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:127763124 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CCAGAGATGG TTTAAATATA
  CACAGACATG GCTTTTACCT GTAGCCAAGC ACTTAGTAGG CTGAGGCAGG AGAATTGCTA
  TGAGTTTGAT CTAGCCTGGG CTATATAGTG AGTTCCAGGC TAACATGGGC TACAGAGTGA
  GACCTTGTCT CAAAAAAAAT TATTATCCTA AATAAAAGAA TTAAGAAGTG TCTGGGGAGT
  R
  GGGGGCTGGA CTCCAGATGC CCCCATCTTG ACACTGGACT TGGTCAACCT CACTTTTTCT
  TTGAAGTGGC TCATTGTGAT TACCTTGGGC ACATCCTGGG ATGAAGGAAG GTGGCCGGGG
  ACACGTGGCT CTTGAAACAG CTGGCATATT TTTCTTGTGT TTTAGGCCCC TCTCAGAGTT
  TGAATAGAAC TGACTTGGTC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss135876659	ENSMUSSNP3227720	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	A	G
ss320958791	CHEV_3_127672393	CHEVERUD	SCREENING_POP	f	SNP				G	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs51561145					SNP	A	A	G	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:127763124 () rs orientation: forward

Symbol	Name	Function Class
Gm35667	predicted gene, 35667	1446 bp upstream
Gm65460	predicted gene, 65460	356 bp upstream
Rr52	regulatory region 52	506 bp proximal
Rr584913	regulatory region 584913	1499 bp proximal
Rr584914	regulatory region 584914	1599 bp proximal