rs51565826 SNP Detail

Summary

• ID
  rs51565826
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:32387809 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGTTAGTGCC ACCCAGAGGA
  CCTTAAAACA TCCTCAAGAG CACAGGAAGA GCATCTTACT GCTATGCGTT TTCCTTGCAG
  GACTGGACCT GGCCTAAGCT TGACAGCAAA CGCACTGAGT ACTGCAGTAG GGCCTTGGGG
  CCTGACCCAT CTGCTGCTTT GTGCAGATCG GCTTGACAGG GTGGTCCTAG GAGGAATTGC
  R
  CCCAGGCTTC CCTGCTTCAT GAGGACTGGC CAACTCTGGC AGGCTCACCT GGATCCATTC
  ATGTGGTCAT ACTCCCGCTT GACATTGACT CTCACTGGCT GGTTGATCCA CTCCTGCTGC
  GGTGGCAGGG GGTTGATTTT GTGGGGCTGC CCGTAGTCAG GACTCCCCGA AGCAGTCATA
  TCTGCCTTGG GGAGATGGGC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss61365469	NES16749248	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	A	G	G	G	G	G	G	G	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs51565826					SNP	G	G	G	G	G	G	A	G	G	G	G	G	G	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss61365469	NES16749248	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:32387809 () rs orientation: forward

Symbol	Name	Function Class
Fli1	Friend leukemia integration 1	within coordinates
Gm38292	predicted gene, 38292	820 bp downstream