rs51568325 SNP Detail

Summary

• ID
  rs51568325
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr16:77158704 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TGAGTAATTC CCAACTAGGC ACAAGACAAG AAATAGAAAC
  TTAACATCTG AGTTTCTTTT TCTGTCTTTG GGATAAAATG CTCATCAAGA GGCAACTTCG
  R
  GAAGGAGGGG CTTATTTAGA TTCTGTTCTG AGAGGATGCA GGCCATCCTG ATGGGAAAGG
  CTCGAACGCC AAGCGGCAGG CAGCTAGGGA TGGATTCTG                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	LG/J	SM/J
ss148392322	ENSMUSSNP4335459	ENSEMBL	ENSEMBL_Sanger	f	SNP	G
ss325255224	CHEV_16_77362061	CHEVERUD	SCREENING_POP	f	SNP		A	G
SNP Consensus Information
SNP					Consensus Type	A/J	LG/J	SM/J
rs51568325					SNP	G	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr16:77158704 () rs orientation: forward

Symbol	Name	Function Class
D16Mit217	DNA Segment, Chr 16 Massachusetts Institute of Technology 217	390 bp distal
Mir99ahg	Mir99a and Mirlet7c-1 host gene (non-protein coding)	within coordinates
Tssr139060	transcription start site region 139060	290 bp downstream
Tssr139061	transcription start site region 139061	625 bp upstream