rs51569063 SNP Detail

Summary

• ID
  rs51569063
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr5:114293564 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGCCAGGTGA GGGCTGAGCC
  AGCGCCAGGA CTGTGGTGGC AGGTAAGTAA GTGTGCTGCA GGGAATTCCA ACTCCTGGTG
  CCTCCTCTGA GCACTGGCCA AGCCCCTCCC CTGTGGCCTG ATACAGCACA CCACAGCCTC
  CTGCTGAAAG GTGACACTCA GAAGGCCGGG CTCCCTTAGT CACCCTGTGG GCACTTGTGA
  S
  ACTCTCCTGA GAATGGAACT GGTGGCCACG TCCCCAGTGT TGGTAAGTGG CCCTAAACAT
  TCAGGAGCTG AACCGGGTGG GAGAAAAAAA AAGTCTCAAG TAGAGATGGG GACTGTAGGA
  TGCTGTCCCT GTCCCTCCAA GACCTTGACT AGACAGAGTG AATGTGTTAT TTTGGGAAGG
  GGACAAGCCC TCCACCTGCT                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss60825947	NES16029824	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	C	G	G	G	C	G	G	G	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs51569063					SNP	G	G	G	G	G	G	C	G	G	G	C	G	G	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss60825947	NES16029824	PERLEGEN	MM_PANEL	f	SNP	C/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr5:114293564 () rs orientation: forward

Symbol	Name	Function Class
Acacb	acetyl-Coenzyme A carboxylase beta	within coordinates
Rr108154	regulatory region 108154	364 bp distal
Rr108155	regulatory region 108155	1837 bp proximal
Rr120008	regulatory region 120008	1370 bp proximal
Rr120009	regulatory region 120009	1742 bp proximal
Tssr48071	transcription start site region 48071	70 bp downstream
Tssr48072	transcription start site region 48072	36 bp downstream
Tssr48073	transcription start site region 48073	within coordinates