rs51571155 SNP Detail

Summary

• ID
  rs51571155
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:125320138 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GAGTG GCTTCTGCAA GAAGACAAAT
  R
  TCCTTGACTA CATATAATTG GGCCA                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J	LG/J	SM/J
ss145400663	ENSMUSSNP5777191	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G
ss319953749	CHEV_1_127288978	CHEVERUD	SCREENING_POP	f	SNP			G	A
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J	LG/J	SM/J
rs51571155					SNP	G	G	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:125320138 () rs orientation: forward

Symbol	Name	Function Class
Actr3	ARP3 actin-related protein 3	504 bp downstream
Rr417385	regulatory region 417385	1789 bp distal
Tssr13374	transcription start site region 13374	1365 bp downstream