rs51573154 SNP Detail

Summary

• ID
  rs51573154
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr14:61564032 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TCAAAAGAAT AAGCCAAGGT GGATTTACGA TCAAGTACAC
  GGAAGTCAAC ACTAGAGAAG CCAATGCATC TCCAGAACAC TCCTACTTGG AGCCCCGAAG
  Y
  ACAGTGTGGA TGCAAACAGG AGGACTAATG TCTCCTCAAA GGCTTCTAGC CTATCAAACA
  CCGACTTACT TACTTATACC TGTAAAATTT TCAGTTTGG                       
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss139613006	ENSMUSSNP4041881	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	T	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs51573154					SNP	C	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:61564032 () rs orientation: forward

Symbol	Name	Function Class
Gm5461	predicted gene 5461	773 bp upstream
Gm62465	predicted gene, 62465	647 bp upstream
Tssr129059	transcription start site region 129059	689 bp upstream