rs51576598 SNP Detail

Summary

• ID
  rs51576598
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr14:23512445 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TAGGCTTGGC TGGTAAATTG
  CCGGCTTAAA GCTGTGGCTC TTCTCCTGCA GCTCAGATCC ATCTGTTTCT TGCCAGCTTT
  TATCACTGAG AGCATTTATT GACTTTTGCT AAGGGGTCAG GTCCTAGTGG GTCAGGCTTA
  GAGGTCCACC ACTTTCAGAG TTTCTGTTTT CATGGGGAAC ACACACCTTG TTCCTTTTTT
  K
  ATTTTACTTC AATCCAGAGA TGCTAAGTGG TAAATCTGGG GTCCCATCAT GCCTCAAGGT
  GGGCACCTAG AACACTGGGG ACCAGGATGC TTGTTCTTCC AGGGCTACGG GGTATGTCCT
  GCTGCAGGTG CCCTGGGGAC CATTTCAGGT TCTTACTATT TGAGTACAGA CGTGCTGAAA
  AAGACCTTTT CCAGGCCTCC                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss62140093	NES17177179	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	T	G	G	G	G	G	G	G	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs51576598					SNP	G	G	G	G	G	G	T	G	G	G	G	G	G	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss62140093	NES17177179	PERLEGEN	MM_PANEL	f	SNP	G/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:23512445 () rs orientation: forward

Symbol	Name	Function Class
Kcnma1	potassium large conductance calcium-activated channel, subfamily M, alpha member 1	within coordinates
Tssr127715	transcription start site region 127715	1745 bp downstream