rs51578159 SNP Detail

Summary

• ID
  rs51578159
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr13:69017026 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTGTCTTAGC AGAACACAGA
  CCCTAGCCAG GCACCAAGAT GTGAGCTGTA GGGAAGGTTG ACCACCACAT GATTGGGATA
  TTTCCATAAG TTGTACTGGA CACTCTTTGG GAAAATGTTA AGTAGACTGC AGTAGCCAAG
  CCAGGGCACT GACGACATGT GCATGTGCCT ACATTTCCCA GACACTCACG ACAGACAGGG
  R
  TGTGGATGTG TCACTTGAAA TGGAAGCATC TGCTTGAATC CCAGAAGACA TTCAGACACT
  TTCCGGCATC ACGGGAATCA GAGATGAGTA AGGGTAACAG CCCCAATTCT CACTGTTAGA
  GTAGAGGTGT GGAGACCAGT TAGGTTAAAT CGATGGGGGA TTTCACAGGC GTGCTTATTC
  TGAGACTTGA GGAACATGGA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss52647690	NES15469361	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	G	G	G	G	A	G	G	G	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs51578159					SNP	G	G	G	G	G	G	G	G	G	G	A	G	G	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss52647690	NES15469361	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr13:69017026 () rs orientation: forward

Symbol	Name	Function Class
Adcy2	adenylate cyclase 2	within coordinates
Rr277015	regulatory region 277015	226 bp distal
Rr280122	regulatory region 280122	1348 bp proximal