rs51584742 SNP Detail

Summary

• ID
  rs51584742
• Variation Type
  SNP
• Alleles
  G

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:4218504 (GRCm39)
• SNP Orientation to the Genome
  reverse

• SNP Reference Flanking Sequence

                                        ATAAC TTACTGTAAA CAGATAATAA
  G
  CCTTGACGTC ATATAAAAAC CAAAG                                      
  
  G = G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323240832	CHEV_10_6078037	CHEVERUD	SCREENING_POP	f	SNP	G	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs51584742					SNP	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:4218504 () rs orientation: reverse

Symbol	Name	Function Class
Akap12	A kinase anchor protein 12	within coordinates
Cpgi1267	CpG island 1267	1362 bp distal
Gm67397	predicted gene, 67397	within coordinates
Rr384063	regulatory region 384063	1939 bp downstream
Rr384064	regulatory region 384064	607 bp upstream
Rr426945	regulatory region 426945	1208 bp distal
Tssr3114	transcription start site region 3114	1973 bp downstream
Tssr92242	transcription start site region 92242	20 bp downstream