rs51585348 SNP Detail

Summary

• ID
  rs51585348
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:137042888 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TTTCTTGTTC TAATTATTTC TGTAGGCACT GTGAAATGAC
  CCCCCAGAAT CTCACTTCCT TTACTATACA GCATTAGAGA GAGGCACAAA TTCATCCTCA
  Y
  TTCCCCAGGG CGAATCTAGG CCCTTAGAGG ACAAGTATGT CAGCCCGTGA GGACAGCACT
  TAAGGAGGGC AAGGATTTGA AATCCGCCAG TTTGTGAGA                       
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss135939619	ENSMUSSNP2613089	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	T	C
ss320975354	CHEV_3_137000091	CHEVERUD	SCREENING_POP	f	SNP				T	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs51585348					SNP	T	T	C	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:137042888 () rs orientation: forward

Symbol	Name	Function Class
Tssr35852	transcription start site region 35852	997 bp upstream