rs51586511 SNP Detail

Summary

• ID
  rs51586511
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:101126858 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GTAACCCTAA AGCTGCTTCT
  AAGGCAGTGC AGCACCCCAA GTTTTTTCTG TGAAACTGCC CTGCTGTTCT CATCTGTCTC
  TCCACCGTCT CCCTGAAATC TGTGCCTGGA GACCCGAGTA ACATTTACTT GAGAACAAAA
  AAAAAAAAAA AAAAAAAAAA AAAAAAGCAA AAAGAGTGCT TTCAAAGTCA AGCCCCCAAG
  Y
  GCTTCACGGC TAATCATGTG CCAAGTCACG TGGCTAGGAC AATGACAGGC AGGGTCGCTG
  TCCACAAGAC CTTTCAATTA GGTAGACTTC TCTCATGTTT ACACCCTTAA TGGAGCTATG
  AATTATCTTT GTTTACTAGG ATTAAGACAT GATCTCATCT CAGTGATTTA GAATAGCAAT
  TGTCAATATG GGTCTACTCC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J
ss135545464	ENSMUSSNP3269629	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J
rs51586511					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:101126858 () rs orientation: forward

Symbol	Name	Function Class
Gm65590	predicted gene, 65590	within coordinates
Rr581978	regulatory region 581978	535 bp proximal