rs51593263 SNP Detail

Summary

• ID
  rs51593263
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:105074544 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        GGTATTTCTT TGTTTCTAAG TAACTTGAAT TCAAATGTTG
  AAGGACTTAT TGTAAACAAT TGATTTTCCT ACTCATATGC TATCAACTAC TGCTTAGCTT
  R
  CATATATATA TATATATATA TATATATATA TATATATATA TATATTTCCC TATCCCACTG
  TGTTTCCACT CTTACTTTTG ACTGCCTTAC CCTTACAAT                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss147491393	ENSMUSSNP4677068	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	A	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs51593263					SNP	G	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:105074544 () rs orientation: forward

Symbol	Name	Function Class
Rr212535	regulatory region 212535	within coordinates
Tmtc2	transmembrane and tetratricopeptide repeat containing 2	within coordinates
Tssr95614	transcription start site region 95614	526 bp downstream
Tssr95615	transcription start site region 95615	167 bp downstream