rs51596385 SNP Detail

Summary

• ID
  rs51596385
• Variation Type
  SNP
• Alleles
  T

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr11:73135378 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CTCTG ACCCAACCCT GGGTTTTGTC
  T
  TTTAAGTCTG AGGTCCTGAA AGGTT                                      
  
  T = T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	LG/J	SM/J
ss132423145	ENSMUSSNP4967538	ENSEMBL	ENSEMBL_Sanger	f	SNP	T
ss323746087	CHEV_11_73058054	CHEVERUD	SCREENING_POP	f	SNP		T	T
SNP Consensus Information
SNP					Consensus Type	A/J	LG/J	SM/J
rs51596385					SNP	T	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr11:73135378 () rs orientation: forward

Symbol	Name	Function Class
Rr236158	regulatory region 236158	1223 bp proximal
Trpv1	transient receptor potential cation channel, subfamily V, member 1	within coordinates