rs51603758 SNP Detail

Summary

• ID
  rs51603758
• Variation Type
  SNP
• Alleles
  G

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:127223347 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CTGTC TTTTGAGAAT CTCAGTTCTC
  G
  ACTAGATGGG GGTATCTGGG AAGCC                                      
  
  G = G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J
ss147413924	ENSMUSSNP705159	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J
rs51603758					SNP	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:127223347 () rs orientation: forward

Symbol	Name	Function Class
Cpgi14848	CpG island 14848	642 bp proximal
Gjb3	gap junction protein, beta 3	within coordinates
Gm40251	predicted gene, 40251	within coordinates
Rr599858	regulatory region 599858	1792 bp distal
Rr599859	regulatory region 599859	404 bp distal
Rr599860	regulatory region 599860	81 bp distal
Rr599861	regulatory region 599861	163 bp proximal
Rr599862	regulatory region 599862	664 bp proximal
Rr599863	regulatory region 599863	1280 bp proximal
Tssr43418	transcription start site region 43418	399 bp upstream
Tssr43419	transcription start site region 43419	993 bp downstream
Tssr43420	transcription start site region 43420	1221 bp downstream
Tssr43421	transcription start site region 43421	1245 bp downstream